STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ44186.1Polyhydroxyalkanoate synthase. (613 aa)    
Predicted Functional Partners:
SDI51674.1
Poly(3-hydroxybutyrate) depolymerase.
 
  
 0.928
SDJ15994.1
Phosphate butyryltransferase.
 
 
 0.875
SDI91857.1
3-hydroxybutyryl-CoA dehydratase.
 
  
 0.838
SDI47963.1
3-oxoacyl-[acyl-carrier-protein] reductase.
  
 
 0.813
SDI51777.1
Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.777
SDI48121.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
     
 0.715
SDI02916.1
NTE family protein.
 
   
 0.612
SDH99473.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.592
SDI11990.1
3-hydroxyacyl-CoA dehydrogenase.
     
 0.592
SDJ00583.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.592
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
Server load: low (22%) [HD]