STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DKAM_0152Glycosyl transferase, family 2. (470 aa)    
Predicted Functional Partners:
DKAM_0151
Putative ATP-dependent helicase.
     
 0.791
DKAM_0153
Zn-dependent hydrolase of the beta-lactamase fold-like protein.
       0.656
DKAM_0150
ABC transporter related protein.
       0.583
DKAM_0149
SufBD protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
     
 0.580
DKAM_0591
Radical SAM domain protein; COG0535 Predicted Fe-S oxidoreductases; pfam04055, Radical_SAM, Radical SAM superfamily.
 
   
 0.563
DKAM_0154
Hypothetical protein.
       0.550
DKAM_0155
Hypothetical protein.
       0.540
DKAM_0575
COG2453 Predicted protein-tyrosine phosphatase; pfam00782, DSPc, Dual specificity phosphatase, catalytic domain.
 
 
 0.537
DKAM_0606
Dolichol-phosphate mannosyltransferase.
 
 
 0.517
DKAM_0506
Pfam01943, Polysacc_synt, Polysaccharide biosynthesis protein; pfam03023, MVIN, MviN-like protein; pfam07690, MFS_1, Major Facilitator Superfamily.
  
  
 0.508
Your Current Organism:
Desulfurococcus amylolyticus
NCBI taxonomy Id: 490899
Other names: D. amylolyticus 1221n, Desulfurococcus amylolyticus 1221n, Desulfurococcus kamchatkensis 1221n, Proteinoruptor kamchatkensis 1221n
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.