Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DKAM_0023 | DKAM_0161 | DUF460 domain containing protein. | Phosphoesterase, DHHA1. | 0.571 |
DKAM_0114 | DKAM_0161 | IS element ISDka1 orfB, putative transposase. | Phosphoesterase, DHHA1. | 0.410 |
DKAM_0114 | DKAM_0668 | IS element ISDka1 orfB, putative transposase. | Uncharacterized protein containing a von Willebrand factor type A (vWA) domain. | 0.407 |
DKAM_0161 | DKAM_0023 | Phosphoesterase, DHHA1. | DUF460 domain containing protein. | 0.571 |
DKAM_0161 | DKAM_0114 | Phosphoesterase, DHHA1. | IS element ISDka1 orfB, putative transposase. | 0.410 |
DKAM_0161 | DKAM_0162 | Phosphoesterase, DHHA1. | Hypothetical protein. | 0.588 |
DKAM_0161 | DKAM_0509 | Phosphoesterase, DHHA1. | COG1955 Archaeal flagella assembly protein J. | 0.497 |
DKAM_0161 | DKAM_0668 | Phosphoesterase, DHHA1. | Uncharacterized protein containing a von Willebrand factor type A (vWA) domain. | 0.498 |
DKAM_0161 | DKAM_0928 | Phosphoesterase, DHHA1. | Putative uncharacterized protein. | 0.459 |
DKAM_0161 | DKAM_0984 | Phosphoesterase, DHHA1. | Phosphoesterase, RecJ domain protein. | 0.537 |
DKAM_0162 | DKAM_0161 | Hypothetical protein. | Phosphoesterase, DHHA1. | 0.588 |
DKAM_0509 | DKAM_0161 | COG1955 Archaeal flagella assembly protein J. | Phosphoesterase, DHHA1. | 0.497 |
DKAM_0668 | DKAM_0114 | Uncharacterized protein containing a von Willebrand factor type A (vWA) domain. | IS element ISDka1 orfB, putative transposase. | 0.407 |
DKAM_0668 | DKAM_0161 | Uncharacterized protein containing a von Willebrand factor type A (vWA) domain. | Phosphoesterase, DHHA1. | 0.498 |
DKAM_0928 | DKAM_0161 | Putative uncharacterized protein. | Phosphoesterase, DHHA1. | 0.459 |
DKAM_0984 | DKAM_0161 | Phosphoesterase, RecJ domain protein. | Phosphoesterase, DHHA1. | 0.537 |