STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DKAM_0200MATE efflux family protein. (470 aa)    
Predicted Functional Partners:
tbp
Transcription factor - TATA-box-binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
   
    0.769
DKAM_0201
Predicted hydrolase (HAD superfamily).
       0.761
DKAM_0202
Molybdenum cofactor synthesis domain protein; COG0521 Molybdopterin biosynthesis enzymes.
       0.752
gap
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH).
  
  
 0.713
rpl15
50S ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
    
   0.617
rps6e
30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.606
DKAM_0199
Protein of unknown function (DUF1464).
       0.564
DKAM_0257
ABC transporter related.
  
  
 0.558
DKAM_0339
Daunorubicin resistance ATP-binding protein-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
  
 0.558
DKAM_0346
Daunorubicin resistance ATP-binding protein-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
  
 0.558
Your Current Organism:
Desulfurococcus amylolyticus
NCBI taxonomy Id: 490899
Other names: D. amylolyticus 1221n, Desulfurococcus amylolyticus 1221n, Desulfurococcus kamchatkensis 1221n, Proteinoruptor kamchatkensis 1221n
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.