Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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nnrDCarbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] (517 aa)    
Predicted Functional Partners:
DKAM_1033
Thermosome subunit alpha; COG0459 Chaperonin GroEL (HSP60 family); Belongs to the TCP-1 chaperonin family.
 
  
 0.534
DKAM_0955
COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases.
       0.533
DKAM_0477
Orotidine-5'-phosphate decarboxylase, PyrF.
 
   
 0.502
DKAM_1261
Thermosome subunit beta; COG0459 Chaperonin GroEL (HSP60 family); Belongs to the TCP-1 chaperonin family.
  
  
 0.470
DKAM_0190
Putative Na+/H+ antiporter.
 
   
 0.437
DKAM_0483
Hypothetical protein.
       0.437
DKAM_0525
Phosphoribosylamine--glycine ligase.
  
  
 0.432
DKAM_1450
Isochorismatase hydrolase; COG1335 Amidases related to nicotinamidase; pfam00857, Isochorismatase, Isochorismatase family.
  
    0.417
pdxS
Pyridoxal biosynthesis lyase pdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.
  
    0.413
DKAM_1107
Probable signal recognition particle protein.
 
   
 0.403
Your Current Organism:
Desulfurococcus amylolyticus
NCBI taxonomy Id: 490899
Other names: D. amylolyticus 1221n, Desulfurococcus amylolyticus 1221n, Desulfurococcus kamchatkensis 1221n, Proteinoruptor kamchatkensis 1221n
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