Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DKAM_0200 | DKAM_0498 | MATE efflux family protein. | Daunorubicin resistance ABC transporter, inner membrane subunit B. | 0.430 |
DKAM_0200 | DKAM_0964 | MATE efflux family protein. | ABC-2 type transporter. | 0.430 |
DKAM_0200 | DKAM_0965 | MATE efflux family protein. | ABC-2 type transporter. | 0.430 |
DKAM_0200 | DKAM_0966 | MATE efflux family protein. | ABC transporter related. | 0.551 |
DKAM_0289 | DKAM_0966 | Oligopeptide/dipeptide ABC transporter, ATPase subunit. | ABC transporter related. | 0.781 |
DKAM_0488 | DKAM_0966 | ABC transporter transmembrane protein. | ABC transporter related. | 0.831 |
DKAM_0495 | DKAM_0498 | ABC transporter, ATP binding subunit; COG0845 Membrane-fusion protein. | Daunorubicin resistance ABC transporter, inner membrane subunit B. | 0.636 |
DKAM_0495 | DKAM_0966 | ABC transporter, ATP binding subunit; COG0845 Membrane-fusion protein. | ABC transporter related. | 0.897 |
DKAM_0498 | DKAM_0200 | Daunorubicin resistance ABC transporter, inner membrane subunit B. | MATE efflux family protein. | 0.430 |
DKAM_0498 | DKAM_0495 | Daunorubicin resistance ABC transporter, inner membrane subunit B. | ABC transporter, ATP binding subunit; COG0845 Membrane-fusion protein. | 0.636 |
DKAM_0498 | DKAM_0832 | Daunorubicin resistance ABC transporter, inner membrane subunit B. | MATE efflux family protein. | 0.430 |
DKAM_0498 | DKAM_0964 | Daunorubicin resistance ABC transporter, inner membrane subunit B. | ABC-2 type transporter. | 0.482 |
DKAM_0498 | DKAM_0966 | Daunorubicin resistance ABC transporter, inner membrane subunit B. | ABC transporter related. | 0.772 |
DKAM_0832 | DKAM_0498 | MATE efflux family protein. | Daunorubicin resistance ABC transporter, inner membrane subunit B. | 0.430 |
DKAM_0832 | DKAM_0964 | MATE efflux family protein. | ABC-2 type transporter. | 0.430 |
DKAM_0832 | DKAM_0965 | MATE efflux family protein. | ABC-2 type transporter. | 0.430 |
DKAM_0832 | DKAM_0966 | MATE efflux family protein. | ABC transporter related. | 0.551 |
DKAM_0962 | DKAM_0963 | 30S ribosomal protein S25e. | Protein of unknown function DUF998. | 0.584 |
DKAM_0962 | DKAM_0964 | 30S ribosomal protein S25e. | ABC-2 type transporter. | 0.576 |
DKAM_0962 | DKAM_0965 | 30S ribosomal protein S25e. | ABC-2 type transporter. | 0.576 |
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