Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DKAM_0238 | pcm | DKAM_0238 | DKAM_1067 | Radical SAM domain protein; COG0731 Fe-S oxidoreductases. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.580 |
| DKAM_0530 | eno | DKAM_0530 | DKAM_1440 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.429 |
| DKAM_0530 | pcm | DKAM_0530 | DKAM_1067 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.478 |
| DKAM_0955 | eIF5A | DKAM_0955 | DKAM_0823 | COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases. | Translation initiation factor IF-5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | 0.537 |
| DKAM_0955 | eno | DKAM_0955 | DKAM_1440 | COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.490 |
| DKAM_0955 | pcm | DKAM_0955 | DKAM_1067 | COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.708 |
| DKAM_1075 | eno | DKAM_1075 | DKAM_1440 | tRNA pseudouridine synthase D. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.416 |
| DKAM_1075 | pcm | DKAM_1075 | DKAM_1067 | tRNA pseudouridine synthase D. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.405 |
| DKAM_1450 | pcm | DKAM_1450 | DKAM_1067 | Isochorismatase hydrolase; COG1335 Amidases related to nicotinamidase; pfam00857, Isochorismatase, Isochorismatase family. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.415 |
| eIF5A | DKAM_0955 | DKAM_0823 | DKAM_0955 | Translation initiation factor IF-5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases. | 0.537 |
| eIF5A | pcm | DKAM_0823 | DKAM_1067 | Translation initiation factor IF-5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.461 |
| eno | DKAM_0530 | DKAM_1440 | DKAM_0530 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.429 |
| eno | DKAM_0955 | DKAM_1440 | DKAM_0955 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases. | 0.490 |
| eno | DKAM_1075 | DKAM_1440 | DKAM_1075 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | tRNA pseudouridine synthase D. | 0.416 |
| eno | pcm | DKAM_1440 | DKAM_1067 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.515 |
| pcm | DKAM_0238 | DKAM_1067 | DKAM_0238 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Radical SAM domain protein; COG0731 Fe-S oxidoreductases. | 0.580 |
| pcm | DKAM_0530 | DKAM_1067 | DKAM_0530 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.478 |
| pcm | DKAM_0955 | DKAM_1067 | DKAM_0955 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases. | 0.708 |
| pcm | DKAM_1075 | DKAM_1067 | DKAM_1075 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | tRNA pseudouridine synthase D. | 0.405 |
| pcm | DKAM_1450 | DKAM_1067 | DKAM_1450 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Isochorismatase hydrolase; COG1335 Amidases related to nicotinamidase; pfam00857, Isochorismatase, Isochorismatase family. | 0.415 |
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