STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DKAM_1079TrkA-N domain protein; COG0569 K+ transport systems, NAD-binding component. (218 aa)    
Predicted Functional Partners:
DKAM_1090
Pfam02386, TrkH, Cation transport protein.
 
 
 0.950
DKAM_0211
MoaD family protein; COG0314 Molybdopterin converting factor, large subunit.
  
    0.706
DKAM_1033
Thermosome subunit alpha; COG0459 Chaperonin GroEL (HSP60 family); Belongs to the TCP-1 chaperonin family.
     
 0.548
DKAM_1261
Thermosome subunit beta; COG0459 Chaperonin GroEL (HSP60 family); Belongs to the TCP-1 chaperonin family.
     
 0.548
DKAM_0955
COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases.
   
 
 0.506
ef1b
Elongation factor 1-beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.
       0.484
DKAM_1077
COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation.
       0.472
DKAM_1457
COG0180 Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.462
DKAM_0479
COG0519 GMP synthase, PP-ATPase domain/subunit.
       0.459
DKAM_0684
Cation transport ATPase.
  
  
 0.420
Your Current Organism:
Desulfurococcus amylolyticus
NCBI taxonomy Id: 490899
Other names: D. amylolyticus 1221n, Desulfurococcus amylolyticus 1221n, Desulfurococcus kamchatkensis 1221n, Proteinoruptor kamchatkensis 1221n
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.