Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DKAM_0022 | DKAM_1064 | DKAM_0022 | DKAM_1064 | RIO-like serine/threonine kinase. | COG1439 Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module. | 0.999 |
DKAM_0022 | DKAM_1087 | DKAM_0022 | DKAM_1087 | RIO-like serine/threonine kinase. | Putative kinase. | 0.952 |
DKAM_0022 | DKAM_1088 | DKAM_0022 | DKAM_1088 | RIO-like serine/threonine kinase. | Predicted RNA-binding protein (contains KH domains). | 0.956 |
DKAM_0022 | DKAM_1365 | DKAM_0022 | DKAM_1365 | RIO-like serine/threonine kinase. | 30S ribosomal protein S4P. | 0.999 |
DKAM_0022 | eIF1A | DKAM_0022 | DKAM_1086 | RIO-like serine/threonine kinase. | Translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | 0.594 |
DKAM_0022 | rps11 | DKAM_0022 | DKAM_1364 | RIO-like serine/threonine kinase. | 30S ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.999 |
DKAM_0022 | rps3 | DKAM_0022 | DKAM_1169 | RIO-like serine/threonine kinase. | 30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. | 0.999 |
DKAM_0022 | rps3ae | DKAM_0022 | DKAM_1335 | RIO-like serine/threonine kinase. | 30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.949 |
DKAM_0022 | rps5 | DKAM_0022 | DKAM_1155 | RIO-like serine/threonine kinase. | 30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. | 0.999 |
DKAM_0022 | rps6e | DKAM_0022 | DKAM_1348 | RIO-like serine/threonine kinase. | 30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.999 |
DKAM_1064 | DKAM_0022 | DKAM_1064 | DKAM_0022 | COG1439 Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module. | RIO-like serine/threonine kinase. | 0.999 |
DKAM_1064 | DKAM_1087 | DKAM_1064 | DKAM_1087 | COG1439 Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module. | Putative kinase. | 0.999 |
DKAM_1064 | DKAM_1088 | DKAM_1064 | DKAM_1088 | COG1439 Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module. | Predicted RNA-binding protein (contains KH domains). | 0.908 |
DKAM_1064 | DKAM_1365 | DKAM_1064 | DKAM_1365 | COG1439 Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module. | 30S ribosomal protein S4P. | 0.999 |
DKAM_1064 | rps11 | DKAM_1064 | DKAM_1364 | COG1439 Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module. | 30S ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.999 |
DKAM_1064 | rps3 | DKAM_1064 | DKAM_1169 | COG1439 Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module. | 30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. | 0.999 |
DKAM_1064 | rps3ae | DKAM_1064 | DKAM_1335 | COG1439 Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module. | 30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.999 |
DKAM_1064 | rps5 | DKAM_1064 | DKAM_1155 | COG1439 Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module. | 30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. | 0.999 |
DKAM_1064 | rps6e | DKAM_1064 | DKAM_1348 | COG1439 Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module. | 30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.999 |
DKAM_1087 | DKAM_0022 | DKAM_1087 | DKAM_0022 | Putative kinase. | RIO-like serine/threonine kinase. | 0.952 |
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