STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BOH78_0502Putative oxidoreductase YgjR. (347 aa)    
Predicted Functional Partners:
BOH78_0198
60S ribosomal protein L32.
 
      0.862
BOH78_3456
Cell growth-regulated gene 1 protein.
  
 
 0.811
BOH78_0468
Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family.
  
 
 0.768
BOH78_2178
Tryptophan synthase.
     
 0.714
BOH78_4821
Aspartate-semialdehyde dehydrogenase.
   
 
 0.697
C5L36_0C00330
Ferrochelatase; Belongs to the ferrochelatase family.
     
 0.685
C5L36_0C09900
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.684
C5L36_0C05230
Uncharacterized protein.
  
  
 0.663
BOH78_5020
Oxygen-dependent coproporphyrinogen-III oxidase.
   
 
 0.657
C5L36_0A12870
Lysine--tRNA ligase.
  
    0.630
Your Current Organism:
Pichia kudriavzevii
NCBI taxonomy Id: 4909
Other names: AJ 4457 [[Candida krusei]], ATCC 24210, ATCC 6258 [[Candida krusei]], ATCC 749 [[Candida krusei]], CBS 5147, CBS 5147 T, CBS 573 [[Candida krusei]], Candida acidothermophilum, Candida krusei, DBVPG 7230 [[Candida krusei]], IAM 12186 [[Candida krusei]], Issatchenkia orientalis, NRRL Y-413 [[Candida krusei]], NRRL Y-5396, NRRL Y-7179 [[Candida krusei]], P. kudriavzevii, Saccharomyces krusei, Saccharomyces sp. p1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.