STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BOH78_2068U3 small nucleolar ribonucleoprotein IMP4. (289 aa)    
Predicted Functional Partners:
C5L36_0E05750
S4 RNA-binding domain-containing protein.
   
 0.999
C5L36_0C08080
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 0.999
C5L36_0C02070
Uncharacterized protein.
   
 
 0.998
C5L36_0C05400
U3 small nucleolar RNA-associated protein 22.
   
  0.998
BOH78_3641
Ribosomal RNA-processing protein 9.
   
 
 0.997
C5L36_0B04850
WD_REPEATS_REGION domain-containing protein.
   
   0.997
C5L36_0A04000
WD_REPEATS_REGION domain-containing protein.
   
 
 0.997
C5L36_0D03020
WD_REPEATS_REGION domain-containing protein.
   
  0.997
BOH78_2841
Transducin beta-like protein 3.
   
   0.996
C5L36_0A00820
BP28CT domain-containing protein.
   
  0.996
Your Current Organism:
Pichia kudriavzevii
NCBI taxonomy Id: 4909
Other names: AJ 4457 [[Candida krusei]], ATCC 24210, ATCC 6258 [[Candida krusei]], ATCC 749 [[Candida krusei]], CBS 5147, CBS 5147 T, CBS 573 [[Candida krusei]], Candida acidothermophilum, Candida krusei, DBVPG 7230 [[Candida krusei]], IAM 12186 [[Candida krusei]], Issatchenkia orientalis, NRRL Y-413 [[Candida krusei]], NRRL Y-5396, NRRL Y-7179 [[Candida krusei]], P. kudriavzevii, Saccharomyces krusei, Saccharomyces sp. p1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.