STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5L36_0A01830DEP domain-containing protein. (1515 aa)    
Predicted Functional Partners:
C5L36_0B04790
Uncharacterized protein.
    
 0.999
C5L36_0A05090
Uncharacterized protein.
   
 0.998
C5L36_0A05700
Uncharacterized protein.
    
 0.998
C5L36_0B00420
Uncharacterized protein.
    
 0.998
C5L36_0B04250
Zinc_ribbon_16 domain-containing protein.
   
 0.997
C5L36_0A11720
Uncharacterized protein.
    
 0.954
BOH78_0686
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.953
BOH78_4781
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.951
BOH78_0009
GTP-binding protein GTR2.
   
 0.945
C5L36_0C05450
Mitochondrial inner membrane protease subunit.
    
 0.901
Your Current Organism:
Pichia kudriavzevii
NCBI taxonomy Id: 4909
Other names: AJ 4457 [[Candida krusei]], ATCC 24210, ATCC 6258 [[Candida krusei]], ATCC 749 [[Candida krusei]], CBS 5147, CBS 5147 T, CBS 573 [[Candida krusei]], Candida acidothermophilum, Candida krusei, DBVPG 7230 [[Candida krusei]], IAM 12186 [[Candida krusei]], Issatchenkia orientalis, NRRL Y-413 [[Candida krusei]], NRRL Y-5396, NRRL Y-7179 [[Candida krusei]], P. kudriavzevii, Saccharomyces krusei, Saccharomyces sp. p1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.