STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5L36_0A02580Uncharacterized protein. (198 aa)    
Predicted Functional Partners:
C5L36_0A06220
Matrin-type domain-containing protein.
   
 0.997
C5L36_0B03055
Small nuclear ribonucleoprotein Sm D2.
   
 0.997
C5L36_0B05890
Sm domain-containing protein.
   
 0.997
BOH78_2261
Protein LUC7.
   
 
 0.996
C5L36_0C00210
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.996
BOH78_0442
Small nuclear ribonucleoprotein Sm D3.
   
 0.995
C5L36_0C01960
Uncharacterized protein.
   
 
 0.994
BOH78_4353
Small nuclear ribonucleoprotein-associated protein B.
    
 0.990
C5L36_0D06040
Uncharacterized protein.
   
 
 0.985
C5L36_0C01420
RRM domain-containing protein.
   
 0.951
Your Current Organism:
Pichia kudriavzevii
NCBI taxonomy Id: 4909
Other names: AJ 4457 [[Candida krusei]], ATCC 24210, ATCC 6258 [[Candida krusei]], ATCC 749 [[Candida krusei]], CBS 5147, CBS 5147 T, CBS 573 [[Candida krusei]], Candida acidothermophilum, Candida krusei, DBVPG 7230 [[Candida krusei]], IAM 12186 [[Candida krusei]], Issatchenkia orientalis, NRRL Y-413 [[Candida krusei]], NRRL Y-5396, NRRL Y-7179 [[Candida krusei]], P. kudriavzevii, Saccharomyces krusei, Saccharomyces sp. p1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.