STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5L36_0B09620RNase_PH domain-containing protein. (384 aa)    
Predicted Functional Partners:
BOH78_3675
Exosome complex component SKI6.
   
 0.999
C5L36_0A08050
RNase_PH domain-containing protein.
   
 0.999
BOH78_3057
Exosome complex component CSL4.
   
 0.999
C5L36_0A10070
Uncharacterized protein.
   
 0.999
C5L36_0A04770
KH_dom_type_1 domain-containing protein.
   
 0.999
C5L36_0C03100
Uncharacterized protein.
   
 0.999
C5L36_0E04380
HRDC domain-containing protein.
   
 0.999
RRP45
Exosome complex component RRP45.
   
 0.999
BOH78_3272
Exosome complex exonuclease DIS3; Belongs to the RNR ribonuclease family.
   
 0.998
C5L36_0C03850
RNase_PH domain-containing protein.
   
 0.998
Your Current Organism:
Pichia kudriavzevii
NCBI taxonomy Id: 4909
Other names: AJ 4457 [[Candida krusei]], ATCC 24210, ATCC 6258 [[Candida krusei]], ATCC 749 [[Candida krusei]], CBS 5147, CBS 5147 T, CBS 573 [[Candida krusei]], Candida acidothermophilum, Candida krusei, DBVPG 7230 [[Candida krusei]], IAM 12186 [[Candida krusei]], Issatchenkia orientalis, NRRL Y-413 [[Candida krusei]], NRRL Y-5396, NRRL Y-7179 [[Candida krusei]], P. kudriavzevii, Saccharomyces krusei, Saccharomyces sp. p1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.