STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5L36_0C09890GATA-type domain-containing protein. (734 aa)    
Predicted Functional Partners:
SHE3
SWI5-dependent HO expression protein 3; RNA-binding protein that binds specific mRNAs including the ASH1 mRNA, coding for a repressor of the HO endonuclease. Part of the mRNA localization machinery that restricts accumulation of certain proteins to the bud and in the daughter cell. Belongs to the SHE3 family.
    
 
 0.651
BOH78_2633
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.587
C5L36_0A12950
PUM-HD domain-containing protein.
    
 
 0.527
C5L36_0C05790
HDAC_interact domain-containing protein.
    
 0.501
C5L36_0B04680
Uncharacterized protein.
    
 
 0.487
C5L36_0E00570
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
   
 
 0.485
C5L36_0C07770
Homeobox domain-containing protein.
    
 0.444
C5L36_0A03460
Uncharacterized protein.
    
 0.429
C5L36_0D06380
Uncharacterized protein.
    
 0.427
C5L36_0C08100
Uncharacterized protein.
    
 0.423
Your Current Organism:
Pichia kudriavzevii
NCBI taxonomy Id: 4909
Other names: AJ 4457 [[Candida krusei]], ATCC 24210, ATCC 6258 [[Candida krusei]], ATCC 749 [[Candida krusei]], CBS 5147, CBS 5147 T, CBS 573 [[Candida krusei]], Candida acidothermophilum, Candida krusei, DBVPG 7230 [[Candida krusei]], IAM 12186 [[Candida krusei]], Issatchenkia orientalis, NRRL Y-413 [[Candida krusei]], NRRL Y-5396, NRRL Y-7179 [[Candida krusei]], P. kudriavzevii, Saccharomyces krusei, Saccharomyces sp. p1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.