STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5L36_0D01470Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. (905 aa)    
Predicted Functional Partners:
C5L36_0A01620
Protein kinase domain-containing protein.
   
 0.999
C5L36_0C09710
ATG11 domain-containing protein.
    
 0.987
BOH78_2920
Tuftelin-interacting protein 11.
    
 
 0.980
C5L36_0A07480
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 0.969
C5L36_0C09190
Lipase_3 domain-containing protein.
   
 
 0.960
C5L36_0A12430
Uncharacterized protein.
    
 0.955
C5L36_0B01020
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.941
BOH78_3244
WD repeat-containing protein mip1.
     
 0.921
BOH78_4603
Target of rapamycin complex subunit LST8.
     
 0.911
BOH78_1928
Serine/threonine-protein phosphatase.
    
  0.902
Your Current Organism:
Pichia kudriavzevii
NCBI taxonomy Id: 4909
Other names: AJ 4457 [[Candida krusei]], ATCC 24210, ATCC 6258 [[Candida krusei]], ATCC 749 [[Candida krusei]], CBS 5147, CBS 5147 T, CBS 573 [[Candida krusei]], Candida acidothermophilum, Candida krusei, DBVPG 7230 [[Candida krusei]], IAM 12186 [[Candida krusei]], Issatchenkia orientalis, NRRL Y-413 [[Candida krusei]], NRRL Y-5396, NRRL Y-7179 [[Candida krusei]], P. kudriavzevii, Saccharomyces krusei, Saccharomyces sp. p1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.