Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C5L36_0E05475Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
C5L36_0D02140
Uncharacterized protein.
   
 
 0.822
BOH78_2618
MRP-L46 domain-containing protein.
   
 
 0.779
C5L36_0B07480
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.759
BOH78_4380
Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.754
BOH78_3873
Uncharacterized protein.
   
 
 0.744
BOH78_3865
MRP-S28 domain-containing protein.
   
   0.741
BOH78_4625
Ribosomal_L27_C domain-containing protein.
   
 
 0.738
C5L36_0B04970
Uncharacterized protein.
   
 
 0.735
BOH78_2022
Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.725
C5L36_0C07790
Uncharacterized protein.
   
 
 0.725
Your Current Organism:
Pichia kudriavzevii
NCBI taxonomy Id: 4909
Other names: AJ 4457 [[Candida krusei]], ATCC 24210, ATCC 6258 [[Candida krusei]], ATCC 749 [[Candida krusei]], CBS 5147, CBS 5147 T, CBS 573 [[Candida krusei]], Candida acidothermophilum, Candida krusei, DBVPG 7230 [[Candida krusei]], IAM 12186 [[Candida krusei]], Issatchenkia orientalis, NRRL Y-413 [[Candida krusei]], NRRL Y-5396, NRRL Y-7179 [[Candida krusei]], P. kudriavzevii, Saccharomyces krusei, Saccharomyces sp. p1
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