Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C5L36_0E04320Uncharacterized protein. (92 aa)    
Predicted Functional Partners:
C5L36_0C01200
Uncharacterized protein.
  
 
 0.995
BOH78_4471
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.994
C5L36_0E03300
Ribosomal_L16 domain-containing protein.
   
 0.994
BOH78_3158
Ribosomal_L18e/L15P domain-containing protein.
  
 
 0.993
BOH78_0861
60S ribosomal protein L31.
   
 
 0.993
BOH78_1095
Ribos_L4_asso_C domain-containing protein.
  
 
 0.993
BOH78_2355
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 
 0.993
BOH78_1510
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.993
C5L36_0A06090
Ribosomal protein L37; Binds to the 23S rRNA.
   
 
 0.993
C5L36_0C03230
Uncharacterized protein.
   
 0.993
Your Current Organism:
Pichia kudriavzevii
NCBI taxonomy Id: 4909
Other names: AJ 4457 [[Candida krusei]], ATCC 24210, ATCC 6258 [[Candida krusei]], ATCC 749 [[Candida krusei]], CBS 5147, CBS 5147 T, CBS 573 [[Candida krusei]], Candida acidothermophilum, Candida krusei, DBVPG 7230 [[Candida krusei]], IAM 12186 [[Candida krusei]], Issatchenkia orientalis, NRRL Y-413 [[Candida krusei]], NRRL Y-5396, NRRL Y-7179 [[Candida krusei]], P. kudriavzevii, Saccharomyces krusei, Saccharomyces sp. p1
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