STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000708615_01338Unannotated protein. (214 aa)    
Predicted Functional Partners:
GCA_000708615_01601
Unannotated protein.
  
  
 0.967
GCA_000708615_01337
Unannotated protein.
 
    0.701
GCA_000708615_00918
Unannotated protein.
      0.595
GCA_000708615_01007
Unannotated protein.
    
 0.587
GCA_000708615_03017
Unannotated protein.
 
   
 0.525
GCA_000708615_02362
Unannotated protein.
     
 0.460
GCA_000708615_03859
Unannotated protein.
      
 0.428
GCA_000708615_01268
Unannotated protein.
  
  
 0.418
GCA_000708615_03689
Unannotated protein.
   
 
  0.418
GCA_000708615_00971
Unannotated protein.
      
 0.405
Your Current Organism:
Chryseobacterium hispalense
NCBI taxonomy Id: 491205
Other names: C. hispalense DSM 25574, Chryseobacterium hispalense AG13, Chryseobacterium hispalense CCUG 63019, Chryseobacterium hispalense DSM 25574, Chryseobacterium sp. AG13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.