STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000708615_01487Unannotated protein. (182 aa)    
Predicted Functional Partners:
GCA_000708615_03885
Unannotated protein.
 
 
 0.702
GCA_000708615_02125
Unannotated protein.
 
  
 0.688
GCA_000708615_01488
Unannotated protein.
     
 0.628
GCA_000708615_01486
Unannotated protein.
       0.578
GCA_000708615_01178
Unannotated protein.
    
 0.577
GCA_000708615_02672
Unannotated protein.
 
     0.497
GCA_000708615_01489
Unannotated protein.
       0.475
GCA_000708615_03517
Unannotated protein.
 
    0.443
GCA_000708615_01136
Unannotated protein.
 
    0.437
GCA_000708615_00588
Unannotated protein.
 
     0.417
Your Current Organism:
Chryseobacterium hispalense
NCBI taxonomy Id: 491205
Other names: C. hispalense DSM 25574, Chryseobacterium hispalense AG13, Chryseobacterium hispalense CCUG 63019, Chryseobacterium hispalense DSM 25574, Chryseobacterium sp. AG13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.