STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000708615_03457Unannotated protein. (116 aa)    
Predicted Functional Partners:
GCA_000708615_03456
Unannotated protein.
       0.783
GCA_000708615_01836
Unannotated protein.
  
     0.769
GCA_000708615_01482
Unannotated protein.
  
     0.763
GCA_000708615_03455
Unannotated protein.
 
     0.763
GCA_000708615_00333
Unannotated protein.
  
     0.750
GCA_000708615_00675
Unannotated protein.
  
     0.694
GCA_000708615_02280
Unannotated protein.
  
     0.684
GCA_000708615_02130
Unannotated protein.
  
     0.678
GCA_000708615_02445
Unannotated protein.
  
     0.644
GCA_000708615_01818
Unannotated protein.
  
     0.641
Your Current Organism:
Chryseobacterium hispalense
NCBI taxonomy Id: 491205
Other names: C. hispalense DSM 25574, Chryseobacterium hispalense AG13, Chryseobacterium hispalense CCUG 63019, Chryseobacterium hispalense DSM 25574, Chryseobacterium sp. AG13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.