STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIP88212.1Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family. (381 aa)    
Predicted Functional Partners:
SIP88199.1
Urea transport system ATP-binding protein.
 
 0.997
SIP88220.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.992
SIP88192.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 0.988
SIP95324.1
Urea transport system ATP-binding protein.
 
 0.985
SIP88231.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.981
SIP95289.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.976
SIP95275.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.954
SIP95340.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 0.943
SIQ40734.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 0.917
SIQ40696.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.897
Your Current Organism:
Marinobacterium stanieri
NCBI taxonomy Id: 49186
Other names: ATCC 27130, CCUG 16021, CIP 106697, DSM 7027, LMG 6847, LMG:6847, M. stanieri, Pseudomonas stanieri, strain 146
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