Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIP89198.1 | SIP89220.1 | SAMN05421647_101181 | SAMN05421647_101182 | Ribosomal protein S6--L-glutamate ligase. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.521 |
SIP89198.1 | SIQ09227.1 | SAMN05421647_101181 | SAMN05421647_102112 | Ribosomal protein S6--L-glutamate ligase. | NADPH-glutathione reductase; Maintains high levels of reduced glutathione. | 0.486 |
SIP89198.1 | SIQ23122.1 | SAMN05421647_101181 | SAMN05421647_10377 | Ribosomal protein S6--L-glutamate ligase. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.530 |
SIP89198.1 | SIQ23145.1 | SAMN05421647_101181 | SAMN05421647_10378 | Ribosomal protein S6--L-glutamate ligase. | Glutathione S-transferase. | 0.530 |
SIP89198.1 | SIQ83445.1 | SAMN05421647_101181 | SAMN05421647_109220 | Ribosomal protein S6--L-glutamate ligase. | Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. | 0.492 |
SIP89198.1 | SIQ88154.1 | SAMN05421647_101181 | SAMN05421647_11096 | Ribosomal protein S6--L-glutamate ligase. | Glutamate synthase (NADPH/NADH) large chain. | 0.730 |
SIP89198.1 | SIQ96974.1 | SAMN05421647_101181 | SAMN05421647_112105 | Ribosomal protein S6--L-glutamate ligase. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.491 |
SIP89198.1 | gshA | SAMN05421647_101181 | SAMN05421647_109211 | Ribosomal protein S6--L-glutamate ligase. | Glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.504 |
SIP89198.1 | pepA | SAMN05421647_101181 | SAMN05421647_10656 | Ribosomal protein S6--L-glutamate ligase. | Aminopeptidase A. Metallo peptidase. MEROPS family M17; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.533 |
SIP89198.1 | rimK | SAMN05421647_101181 | SAMN05421647_106258 | Ribosomal protein S6--L-glutamate ligase. | SSU ribosomal protein S6P modification protein; Belongs to the RimK family. | 0.575 |
SIP89220.1 | SIP89198.1 | SAMN05421647_101182 | SAMN05421647_101181 | Permease of the drug/metabolite transporter (DMT) superfamily. | Ribosomal protein S6--L-glutamate ligase. | 0.521 |
SIQ09227.1 | SIP89198.1 | SAMN05421647_102112 | SAMN05421647_101181 | NADPH-glutathione reductase; Maintains high levels of reduced glutathione. | Ribosomal protein S6--L-glutamate ligase. | 0.486 |
SIQ09227.1 | SIQ23122.1 | SAMN05421647_102112 | SAMN05421647_10377 | NADPH-glutathione reductase; Maintains high levels of reduced glutathione. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.496 |
SIQ09227.1 | SIQ23145.1 | SAMN05421647_102112 | SAMN05421647_10378 | NADPH-glutathione reductase; Maintains high levels of reduced glutathione. | Glutathione S-transferase. | 0.697 |
SIQ09227.1 | SIQ83445.1 | SAMN05421647_102112 | SAMN05421647_109220 | NADPH-glutathione reductase; Maintains high levels of reduced glutathione. | Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. | 0.894 |
SIQ09227.1 | SIQ88154.1 | SAMN05421647_102112 | SAMN05421647_11096 | NADPH-glutathione reductase; Maintains high levels of reduced glutathione. | Glutamate synthase (NADPH/NADH) large chain. | 0.860 |
SIQ09227.1 | SIQ96974.1 | SAMN05421647_102112 | SAMN05421647_112105 | NADPH-glutathione reductase; Maintains high levels of reduced glutathione. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.916 |
SIQ23122.1 | SIP89198.1 | SAMN05421647_10377 | SAMN05421647_101181 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Ribosomal protein S6--L-glutamate ligase. | 0.530 |
SIQ23122.1 | SIQ09227.1 | SAMN05421647_10377 | SAMN05421647_102112 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | NADPH-glutathione reductase; Maintains high levels of reduced glutathione. | 0.496 |
SIQ23122.1 | SIQ23145.1 | SAMN05421647_10377 | SAMN05421647_10378 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Glutathione S-transferase. | 0.974 |
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