STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIP89548.1Amino acid ABC transporter ATP-binding protein, PAAT family. (252 aa)    
Predicted Functional Partners:
SIP89572.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.999
SIP97164.1
L-glutamine ABC transporter membrane protein.
 0.992
SIP89589.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 0.974
SIP92651.1
Amino acid ABC transporter membrane protein 2, PAAT family.
  
 0.974
SIQ89065.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.966
SIQ74323.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.959
SIQ74308.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.955
SIP95173.1
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 0.915
SIP97182.1
Glutamine transport system substrate-binding protein.
 0.909
SIQ67160.1
Peptide/nickel transport system permease protein.
 
    
 0.902
Your Current Organism:
Marinobacterium stanieri
NCBI taxonomy Id: 49186
Other names: ATCC 27130, CCUG 16021, CIP 106697, DSM 7027, LMG 6847, LMG:6847, M. stanieri, Pseudomonas stanieri, strain 146
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