Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIP92728.1 | SIP92744.1 | SAMN05421647_101398 | SAMN05421647_101399 | HAMP domain-containing protein. | Predicted PurR-regulated permease PerM. | 0.586 |
SIP92728.1 | SIP92757.1 | SAMN05421647_101398 | SAMN05421647_101400 | HAMP domain-containing protein. | acyl-CoA thioester hydrolase. | 0.516 |
SIP92744.1 | SIP92728.1 | SAMN05421647_101399 | SAMN05421647_101398 | Predicted PurR-regulated permease PerM. | HAMP domain-containing protein. | 0.586 |
SIP92744.1 | SIP92757.1 | SAMN05421647_101399 | SAMN05421647_101400 | Predicted PurR-regulated permease PerM. | acyl-CoA thioester hydrolase. | 0.679 |
SIP92744.1 | SIP92771.1 | SAMN05421647_101399 | SAMN05421647_101401 | Predicted PurR-regulated permease PerM. | Type II secretion system protein B. | 0.579 |
SIP92744.1 | SIP92788.1 | SAMN05421647_101399 | SAMN05421647_101402 | Predicted PurR-regulated permease PerM. | Type II secretion system protein A. | 0.533 |
SIP92744.1 | SIQ96613.1 | SAMN05421647_101399 | SAMN05421647_11289 | Predicted PurR-regulated permease PerM. | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | 0.527 |
SIP92744.1 | SIQ96682.1 | SAMN05421647_101399 | SAMN05421647_11291 | Predicted PurR-regulated permease PerM. | Flagellar hook protein FlgE. | 0.527 |
SIP92744.1 | purE | SAMN05421647_101399 | SAMN05421647_11181 | Predicted PurR-regulated permease PerM. | 5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.407 |
SIP92757.1 | SIP92728.1 | SAMN05421647_101400 | SAMN05421647_101398 | acyl-CoA thioester hydrolase. | HAMP domain-containing protein. | 0.516 |
SIP92757.1 | SIP92744.1 | SAMN05421647_101400 | SAMN05421647_101399 | acyl-CoA thioester hydrolase. | Predicted PurR-regulated permease PerM. | 0.679 |
SIP92757.1 | SIP92771.1 | SAMN05421647_101400 | SAMN05421647_101401 | acyl-CoA thioester hydrolase. | Type II secretion system protein B. | 0.539 |
SIP92757.1 | SIP92788.1 | SAMN05421647_101400 | SAMN05421647_101402 | acyl-CoA thioester hydrolase. | Type II secretion system protein A. | 0.516 |
SIP92771.1 | SIP92744.1 | SAMN05421647_101401 | SAMN05421647_101399 | Type II secretion system protein B. | Predicted PurR-regulated permease PerM. | 0.579 |
SIP92771.1 | SIP92757.1 | SAMN05421647_101401 | SAMN05421647_101400 | Type II secretion system protein B. | acyl-CoA thioester hydrolase. | 0.539 |
SIP92771.1 | SIP92788.1 | SAMN05421647_101401 | SAMN05421647_101402 | Type II secretion system protein B. | Type II secretion system protein A. | 0.926 |
SIP92788.1 | SIP92744.1 | SAMN05421647_101402 | SAMN05421647_101399 | Type II secretion system protein A. | Predicted PurR-regulated permease PerM. | 0.533 |
SIP92788.1 | SIP92757.1 | SAMN05421647_101402 | SAMN05421647_101400 | Type II secretion system protein A. | acyl-CoA thioester hydrolase. | 0.516 |
SIP92788.1 | SIP92771.1 | SAMN05421647_101402 | SAMN05421647_101401 | Type II secretion system protein A. | Type II secretion system protein B. | 0.926 |
SIQ96613.1 | SIP92744.1 | SAMN05421647_11289 | SAMN05421647_101399 | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | Predicted PurR-regulated permease PerM. | 0.527 |
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