STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIP94699.1TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (355 aa)    
Predicted Functional Partners:
SIP94711.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.924
SIP94731.1
TRAP transporter, DctM subunit.
 
    0.922
SIQ10084.1
TRAP transporter, DctM subunit.
 
    0.782
SIQ10097.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.782
SIQ39512.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.782
SIQ46653.1
TRAP transporter, DctM subunit.
 
    0.782
SIQ46680.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.782
SIQ39491.1
TRAP transporter, DctM subunit.
 
    0.781
SIQ00158.1
TRAP transporter, DctM subunit.
 
    0.780
SIQ00176.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.779
Your Current Organism:
Marinobacterium stanieri
NCBI taxonomy Id: 49186
Other names: ATCC 27130, CCUG 16021, CIP 106697, DSM 7027, LMG 6847, LMG:6847, M. stanieri, Pseudomonas stanieri, strain 146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.