STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIP96945.1Transcriptional regulator, GntR family. (231 aa)    
Predicted Functional Partners:
SIQ75974.1
Transcriptional regulator, GntR family.
  
     0.706
SIP99188.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
  
 0.705
SIP89888.1
Transcriptional regulator, GntR family.
  
     0.669
SIP89692.1
Transcriptional regulator, GntR family.
  
     0.666
SIP90642.1
Transcriptional regulator, GntR family.
  
  
 0.664
SIQ27720.1
Transcriptional regulator, GntR family.
  
  
 0.663
SIQ31242.1
DNA-binding transcriptional regulator, GntR family.
  
     0.661
SIP97012.1
OHCU decarboxylase.
 
     0.582
SIP96975.1
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
     0.555
prmB
[LSU ribosomal protein L3P]-glutamine N5-methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.
    
   0.542
Your Current Organism:
Marinobacterium stanieri
NCBI taxonomy Id: 49186
Other names: ATCC 27130, CCUG 16021, CIP 106697, DSM 7027, LMG 6847, LMG:6847, M. stanieri, Pseudomonas stanieri, strain 146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.