STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ08185.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
SIQ08161.1
Polyhydroxyalkanoate synthesis repressor PhaR.
 
     0.800
SIQ08197.1
MFS transporter, PPP family, 3-phenylpropionic acid transporter.
       0.655
SIP88068.1
Protein of unknown function.
  
     0.610
SIQ27659.1
Protein of unknown function.
  
     0.593
SIQ23211.1
Protein of unknown function.
  
     0.593
SIQ59955.1
Protein of unknown function.
  
     0.581
SIQ65914.1
NAD(P)H dehydrogenase (quinone); Belongs to the WrbA family.
   
    0.558
SIQ66115.1
NAD(P)H dehydrogenase (quinone).
   
    0.558
SIQ74780.1
LysM domain-containing protein.
   
    0.522
SIQ91893.1
LysM domain-containing protein.
   
    0.522
Your Current Organism:
Marinobacterium stanieri
NCBI taxonomy Id: 49186
Other names: ATCC 27130, CCUG 16021, CIP 106697, DSM 7027, LMG 6847, LMG:6847, M. stanieri, Pseudomonas stanieri, strain 146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.