STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ25490.1tRNA 2-thiouridine synthesizing protein D. (132 aa)    
Predicted Functional Partners:
SIQ25513.1
tRNA 2-thiouridine synthesizing protein C; Belongs to the DsrF/TusC family.
 
 0.999
SIQ25532.1
tRNA 2-thiouridine synthesizing protein B.
 
 
 0.998
SIQ25556.1
tRNA 2-thiouridine synthesizing protein E; Part of a sulfur-relay system.
 
 
 0.996
SIQ08849.1
tRNA 2-thiouridine synthesizing protein A; Belongs to the sulfur carrier protein TusA family.
 
 
 0.974
SIQ29411.1
TusA-related sulfurtransferase; Belongs to the sulfur carrier protein TusA family.
 
 
 0.957
SIQ25579.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
       0.682
SIQ25591.1
Purine-binding chemotaxis protein CheW.
       0.682
SIQ25467.1
Modulator of FtsH protease; Belongs to the BI1 family.
       0.662
SIQ29236.1
Anthranilate phosphoribosyltransferase.
 
    0.620
SIQ12978.1
Monoheme cytochrome SoxX (sulfur oxidation).
  
   
 0.602
Your Current Organism:
Marinobacterium stanieri
NCBI taxonomy Id: 49186
Other names: ATCC 27130, CCUG 16021, CIP 106697, DSM 7027, LMG 6847, LMG:6847, M. stanieri, Pseudomonas stanieri, strain 146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.