STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ25988.1Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)    
Predicted Functional Partners:
SIQ26025.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.998
SIQ26005.1
Short chain enoyl-CoA hydratase /Enoyl-CoA hydratase.
 
 
0.976
SIQ13509.1
PAS domain S-box-containing protein.
   
 0.954
SIQ37550.1
Signal transduction histidine kinase.
   
 0.953
SIQ68342.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.952
SIQ68360.1
PAS domain S-box-containing protein.
    
 0.952
SIQ97198.1
Two-component system, NarL family, sensor histidine kinase BarA.
    
 0.934
SIQ26061.1
3-oxoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.930
SIQ95355.1
PAS domain S-box-containing protein.
   
 0.930
SIQ22135.1
PAS domain S-box-containing protein.
    
 0.929
Your Current Organism:
Marinobacterium stanieri
NCBI taxonomy Id: 49186
Other names: ATCC 27130, CCUG 16021, CIP 106697, DSM 7027, LMG 6847, LMG:6847, M. stanieri, Pseudomonas stanieri, strain 146
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