STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ27720.1Transcriptional regulator, GntR family. (242 aa)    
Predicted Functional Partners:
SIQ27743.1
L-lactate dehydrogenase (cytochrome).
  
 0.836
SIQ51382.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.760
SIQ27961.1
Transcriptional regulator, GntR family.
  
  
 0.740
SIP96945.1
Transcriptional regulator, GntR family.
  
  
 0.663
SIQ75974.1
Transcriptional regulator, GntR family.
  
  
 0.607
SIQ31242.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.587
SIQ36230.1
Cytochrome P450.
    
  0.580
SIP89692.1
Transcriptional regulator, GntR family.
  
  
 0.543
SIP98389.1
3-ketosteroid 9alpha-monooxygenase subunit B.
    
  0.535
SIQ10424.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
  0.535
Your Current Organism:
Marinobacterium stanieri
NCBI taxonomy Id: 49186
Other names: ATCC 27130, CCUG 16021, CIP 106697, DSM 7027, LMG 6847, LMG:6847, M. stanieri, Pseudomonas stanieri, strain 146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.