STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ50122.1Glycine betaine/proline transport system substrate-binding protein. (334 aa)    
Predicted Functional Partners:
SIQ50084.1
Glycine betaine/proline transport system ATP-binding protein.
 
 0.999
SIQ50107.1
Glycine betaine/proline transport system permease protein.
 
 0.999
SIQ14980.1
Osmoprotectant transport system permease protein.
 
 
 0.591
purN
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
    0.517
SIQ16585.1
Quinol monooxygenase YgiN.
 
     0.503
SIP88677.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
    
 0.487
potA
Putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
    
 0.487
SIQ15037.1
Osmoprotectant transport system substrate-binding protein.
     
 0.485
purM
Phosphoribosylformylglycinamidine cyclo-ligase.
   
    0.461
SIQ15014.1
Osmoprotectant transport system permease protein.
  
 
 0.458
Your Current Organism:
Marinobacterium stanieri
NCBI taxonomy Id: 49186
Other names: ATCC 27130, CCUG 16021, CIP 106697, DSM 7027, LMG 6847, LMG:6847, M. stanieri, Pseudomonas stanieri, strain 146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.