STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ46553.1EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). (409 aa)    
Predicted Functional Partners:
SIQ67835.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.988
SIQ15514.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.984
SIQ27863.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  0.982
SIQ38493.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.981
SIP92636.1
Diguanylate cyclase with GAF sensor.
 0.977
SIQ50530.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.977
SIQ79760.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  0.977
SIQ15498.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.976
SIQ31774.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.973
SIQ69428.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  0.971
Your Current Organism:
Marinobacterium stanieri
NCBI taxonomy Id: 49186
Other names: ATCC 27130, CCUG 16021, CIP 106697, DSM 7027, LMG 6847, LMG:6847, M. stanieri, Pseudomonas stanieri, strain 146
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