STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ56578.1Serine O-acetyltransferase. (277 aa)    
Predicted Functional Partners:
SIP87793.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.996
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.994
SIQ41889.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.994
SIQ61240.1
Phosphoserine phosphatase.
    
 0.959
SIQ28068.1
Phosphoserine phosphatase.
    
 0.914
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.900
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
 
 0.896
thrB
Homoserine kinase; Belongs to the pseudomonas-type ThrB family.
  
  
  0.886
trpA
Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
 0.878
SIQ72852.1
Homoserine dehydrogenase.
  
  
 0.875
Your Current Organism:
Marinobacterium stanieri
NCBI taxonomy Id: 49186
Other names: ATCC 27130, CCUG 16021, CIP 106697, DSM 7027, LMG 6847, LMG:6847, M. stanieri, Pseudomonas stanieri, strain 146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.