STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ57709.1phospholipid/cholesterol/gamma-HCH transport system permease protein. (370 aa)    
Predicted Functional Partners:
SIQ57665.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.999
SIQ57688.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 0.999
SIQ01187.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 0.998
SIQ01149.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 0.996
SIQ01136.1
Phospholipid transport system substrate-binding protein.
  
 
 0.969
SIQ57645.1
Cholesterol transport system auxiliary component.
 
 
 0.966
SIQ11601.1
Anti-anti-sigma factor.
   
 0.955
SIQ91202.1
STAS domain-containing protein.
   
 0.955
SIQ91360.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
   
 0.955
SIQ01167.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
0.917
Your Current Organism:
Marinobacterium stanieri
NCBI taxonomy Id: 49186
Other names: ATCC 27130, CCUG 16021, CIP 106697, DSM 7027, LMG 6847, LMG:6847, M. stanieri, Pseudomonas stanieri, strain 146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.