STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ97177.1ABC-type uncharacterized transport system, substrate-binding protein. (298 aa)    
Predicted Functional Partners:
SIQ97198.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
  
  0.926
SIQ97156.1
Iron complex outermembrane recepter protein.
 
     0.903
SIQ37550.1
Signal transduction histidine kinase.
    
  0.840
SIQ12746.1
PAS fold-containing protein.
    
  0.811
SIQ68342.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
  0.771
SIQ13509.1
PAS domain S-box-containing protein.
    
  0.755
SIQ68360.1
PAS domain S-box-containing protein.
    
  0.752
SIQ65524.1
Two-component system, LuxR family, sensor kinase FixL.
 
  
  0.752
SIQ91163.1
PAS domain S-box-containing protein.
    
  0.747
SIQ59133.1
PAS domain S-box-containing protein.
    
  0.716
Your Current Organism:
Marinobacterium stanieri
NCBI taxonomy Id: 49186
Other names: ATCC 27130, CCUG 16021, CIP 106697, DSM 7027, LMG 6847, LMG:6847, M. stanieri, Pseudomonas stanieri, strain 146
Server load: low (24%) [HD]