STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ99470.1Hypothetical protein. (404 aa)    
Predicted Functional Partners:
SIQ99431.1
Hypothetical protein.
       0.773
SIQ99452.1
Hypothetical protein.
       0.773
SIQ99490.1
Hypothetical protein.
       0.773
SIQ99509.1
Hypothetical protein.
       0.773
SIQ99390.1
Hypothetical protein.
       0.639
SIQ99413.1
Hypothetical protein.
       0.639
SIQ99323.1
Macrophage killing protein with similarity to conjugation protein.
       0.545
SIQ99344.1
Putative outer membrane core complex of type IVb secretion.
       0.545
SIQ99372.1
Hypothetical protein.
       0.545
SIQ99303.1
Hypothetical protein.
       0.525
Your Current Organism:
Marinobacterium stanieri
NCBI taxonomy Id: 49186
Other names: ATCC 27130, CCUG 16021, CIP 106697, DSM 7027, LMG 6847, LMG:6847, M. stanieri, Pseudomonas stanieri, strain 146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.