STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aflv_1710Uncharacterized conserved protein. (159 aa)    
Predicted Functional Partners:
fliZ
Flagellar biogenesis protein FliZ.
 
  
 0.910
Aflv_1711
Uncharacterized conserved protein.
 
     0.909
sigD
DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family.
  
  
 0.865
fliJ
Flagellar biosynthesis chaperone FliJ.
 
    0.855
fliK
Flagellar hook-length control protein FliK.
 
    0.847
Aflv_1736
Uncharacterized conserved protein.
 
    0.817
cheC
Chemotaxis protein phosphatase CheC.
 
    0.804
fliL
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
    0.804
flhF
Flagellar GTP-binding protein FlhF.
 
    0.802
cheD
Chemotaxis protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
  
    0.782
Your Current Organism:
Anoxybacillus flavithermus
NCBI taxonomy Id: 491915
Other names: A. flavithermus WK1, Anoxybacillus flavithermus WK1, Anoxybacillus flavithermus str. WK1, Anoxybacillus flavithermus strain WK1
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