Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Aflv_2582 | Aflv_2589 | Aflv_2582 | Aflv_2589 | Uncharacterized membrane protein. | Flagellin protein FliA(H); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.542 |
| Aflv_2582 | csrA | Aflv_2582 | Aflv_2580 | Uncharacterized membrane protein. | RNA-binding global regulator CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.832 |
| Aflv_2582 | flgK | Aflv_2582 | Aflv_2584 | Uncharacterized membrane protein. | Flagellar hook-associated protein. | 0.869 |
| Aflv_2582 | flgL | Aflv_2582 | Aflv_2583 | Uncharacterized membrane protein. | Flagellar hook-associated protein. | 0.886 |
| Aflv_2582 | flgM | Aflv_2582 | Aflv_2586 | Uncharacterized membrane protein. | Negative regulator of flagellin synthesis (anti-sigma28 factor). | 0.881 |
| Aflv_2582 | fliD | Aflv_2582 | Aflv_2570 | Uncharacterized membrane protein. | Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.573 |
| Aflv_2582 | fliS | Aflv_2582 | Aflv_2569 | Uncharacterized membrane protein. | Flagellin-specific chaperone FliS. | 0.428 |
| Aflv_2582 | fliW | Aflv_2582 | Aflv_2581 | Uncharacterized membrane protein. | Uncharacterized protein conserved in bacteria; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.894 |
| Aflv_2589 | Aflv_2582 | Aflv_2589 | Aflv_2582 | Flagellin protein FliA(H); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Uncharacterized membrane protein. | 0.542 |
| Aflv_2589 | csrA | Aflv_2589 | Aflv_2580 | Flagellin protein FliA(H); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | RNA-binding global regulator CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.789 |
| Aflv_2589 | flgK | Aflv_2589 | Aflv_2584 | Flagellin protein FliA(H); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar hook-associated protein. | 0.973 |
| Aflv_2589 | flgL | Aflv_2589 | Aflv_2583 | Flagellin protein FliA(H); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar hook-associated protein. | 0.779 |
| Aflv_2589 | flgM | Aflv_2589 | Aflv_2586 | Flagellin protein FliA(H); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Negative regulator of flagellin synthesis (anti-sigma28 factor). | 0.845 |
| Aflv_2589 | fliD | Aflv_2589 | Aflv_2570 | Flagellin protein FliA(H); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.951 |
| Aflv_2589 | fliM | Aflv_2589 | Aflv_1729 | Flagellin protein FliA(H); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar motor switch protein FliM. | 0.939 |
| Aflv_2589 | fliS | Aflv_2589 | Aflv_2569 | Flagellin protein FliA(H); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellin-specific chaperone FliS. | 0.980 |
| Aflv_2589 | fliW | Aflv_2589 | Aflv_2581 | Flagellin protein FliA(H); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Uncharacterized protein conserved in bacteria; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.960 |
| Aflv_2589 | fliY | Aflv_2589 | Aflv_1728 | Flagellin protein FliA(H); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar motor switch protein FliY. | 0.988 |
| csrA | Aflv_2582 | Aflv_2580 | Aflv_2582 | RNA-binding global regulator CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Uncharacterized membrane protein. | 0.832 |
| csrA | Aflv_2589 | Aflv_2580 | Aflv_2589 | RNA-binding global regulator CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Flagellin protein FliA(H); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.789 |
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