STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF53142.1PFAM: Tannase/feruloyl esterase; KEGG: avi:Avi_1909 hypothetical protein. (554 aa)    
Predicted Functional Partners:
AEF55291.1
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: pha:PSHAb0147 putative 4Fe-4S ferredoxin.
   
   0.697
AEF56084.1
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: pfs:PFLU5792 ferredoxin.
   
   0.697
AEF55410.1
KEGG: swi:Swit_4159 NmrA family protein.
 
   0.644
AEF55428.1
PFAM: Cupin 2, conserved barrel; KEGG: hse:Hsero_1010 cupin superfamily protein.
  
     0.640
AEF53074.1
KEGG: lch:Lcho_1439 NmrA family protein.
 
   0.633
AEF55421.1
KEGG: ppu:PP_3195 hypothetical protein.
 
   
 0.625
AEF55412.1
PFAM: Cupin 2, conserved barrel; KEGG: nar:Saro_3421 cupin 2 domain-containing protein.
  
     0.620
AEF55422.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:bll6427 hypothetical protein.
  
    0.576
AEF55423.1
PFAM: Major facilitator superfamily MFS-1; KEGG: bbt:BBta_1937 major facilitator superfamily permease.
  
     0.569
AEF54529.1
KEGG: bcm:Bcenmc03_6279 haloacid dehalogenase, type II; TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; PFAM: Haloacid dehalogenase-like hydrolase.
  
     0.512
Your Current Organism:
Marinomonas posidonica
NCBI taxonomy Id: 491952
Other names: M. posidonica IVIA-Po-181, Marinomonas posidonica IVIA-Po-181, Marinomonas posidonica str. IVIA-Po-181, Marinomonas posidonica strain IVIA-Po-181, Marinomonas sp. IVIA-Po-181
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