STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF53204.1Diguanylate cyclase with GAF sensor; TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; GAF; KEGG: ant:Arnit_1186 PAS/PAC and GAF sensor-containg diguanylate cyclase; SMART: Diguanylate cyclase, predicted; GAF. (478 aa)    
Predicted Functional Partners:
AEF53316.1
Diguanylate phosphodiesterase; KEGG: vsp:VS_II0947 hypothetical protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted.
 
 0.875
AEF55496.1
KEGG: lpa:lpa_02142 Rtn protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted.
 
  
 0.784
AEF56481.1
Response regulator receiver modulated diguanylate phosphodiesterase; KEGG: psm:PSM_A2132 EAL domain protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region.
 
 0.783
AEF54944.1
KEGG: maq:Maqu_3589 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted.
  
 0.779
AEF54543.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: sbm:Shew185_4242 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted.
  
 0.778
AEF53481.1
KEGG: pct:PC1_2200 EAL domain protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted.
 
     0.767
AEF55594.1
KEGG: pat:Patl_2665 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted.
 
     0.767
AEF54639.1
Diguanylate phosphodiesterase; KEGG: cps:CPS_2600 EAL domain-containing protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted.
  
    0.750
AEF56023.1
Diguanylate cyclase/phosphodiesterase with CBS domains; TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Cystathionine beta-synthase, core; Diguanylate cyclase, predicted; KEGG: shn:Shewana3_0554 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted.
  
 0.739
AEF53924.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; Diguanylate cyclase, predicted; KEGG: cja:CJA_3653 hipothetical sensory box/GGDEF family protein; SMART: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; Diguanylate cyclase, predicted.
 
 0.726
Your Current Organism:
Marinomonas posidonica
NCBI taxonomy Id: 491952
Other names: M. posidonica IVIA-Po-181, Marinomonas posidonica IVIA-Po-181, Marinomonas posidonica str. IVIA-Po-181, Marinomonas posidonica strain IVIA-Po-181, Marinomonas sp. IVIA-Po-181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.