STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF54037.1Protein of unknown function UPF0005; PFAM: Uncharacterised protein family UPF0005; KEGG: hel:HELO_2627 K06890; Belongs to the BI1 family. (219 aa)    
Predicted Functional Partners:
AEF54033.1
Sulfur relay protein, TusE/DsrC/DsvC family; Part of a sulfur-relay system.
     
 0.676
AEF54036.1
Sulfur relay protein TusD/DsrE; KEGG: tRNA 5-methylaminomethyl-2-thiouridine synthase TusD; TIGRFAM: Sulphur relay, TusD/DsrE; PFAM: Sulphur relay, DsrE-like protein.
       0.661
AEF54035.1
KEGG: csa:Csal_1924 DsrE-like protein.
 
     0.647
AEF54034.1
Hypothetical protein.
       0.631
AEF54648.1
PFAM: Colicin V production protein; KEGG: ttu:TERTU_2488 CvpA family protein.
  
    0.609
AEF55026.1
Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.
  
     0.602
AEF53767.1
hemX domain protein; PFAM: HemX; KEGG: sde:Sde_3665 YjgF-like protein.
  
     0.540
htpX
HAMAP: protease htpX; KEGG: ppg:PputGB1_1446 heat shock protein HtpX; Belongs to the peptidase M48B family.
  
  
 0.524
AEF54038.1
Hypothetical protein.
       0.512
AEF55023.1
TIGRFAM: Conserved hypothetical protein CHP02099; KEGG: pmy:Pmen_0861 membrane protein-like protein.
  
     0.495
Your Current Organism:
Marinomonas posidonica
NCBI taxonomy Id: 491952
Other names: M. posidonica IVIA-Po-181, Marinomonas posidonica IVIA-Po-181, Marinomonas posidonica str. IVIA-Po-181, Marinomonas posidonica strain IVIA-Po-181, Marinomonas sp. IVIA-Po-181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.