node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF54223.1 | AEF54225.1 | Mar181_1176 | Mar181_1178 | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: pmu:PM1836 hypothetical protein. | Protein of unknown function UPF0029; KEGG: pmr:PMI3552 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0029, Impact; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal. | 0.788 |
AEF54223.1 | AEF54226.1 | Mar181_1176 | Mar181_1179 | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: pmu:PM1836 hypothetical protein. | RmuC-domain protein; PFAM: RmuC; KEGG: psb:Psyr_3666 hypothetical protein. | 0.532 |
AEF54223.1 | rapA | Mar181_1176 | Mar181_1177 | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: pmu:PM1836 hypothetical protein. | Helicase domain-containing protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.819 |
AEF54225.1 | AEF54223.1 | Mar181_1178 | Mar181_1176 | Protein of unknown function UPF0029; KEGG: pmr:PMI3552 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0029, Impact; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal. | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: pmu:PM1836 hypothetical protein. | 0.788 |
AEF54225.1 | AEF54226.1 | Mar181_1178 | Mar181_1179 | Protein of unknown function UPF0029; KEGG: pmr:PMI3552 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0029, Impact; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal. | RmuC-domain protein; PFAM: RmuC; KEGG: psb:Psyr_3666 hypothetical protein. | 0.561 |
AEF54225.1 | era | Mar181_1178 | Mar181_2657 | Protein of unknown function UPF0029; KEGG: pmr:PMI3552 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0029, Impact; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal. | GTP-binding protein Era-like-protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.410 |
AEF54225.1 | rapA | Mar181_1178 | Mar181_1177 | Protein of unknown function UPF0029; KEGG: pmr:PMI3552 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0029, Impact; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal. | Helicase domain-containing protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.792 |
AEF54226.1 | AEF54223.1 | Mar181_1179 | Mar181_1176 | RmuC-domain protein; PFAM: RmuC; KEGG: psb:Psyr_3666 hypothetical protein. | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: pmu:PM1836 hypothetical protein. | 0.532 |
AEF54226.1 | AEF54225.1 | Mar181_1179 | Mar181_1178 | RmuC-domain protein; PFAM: RmuC; KEGG: psb:Psyr_3666 hypothetical protein. | Protein of unknown function UPF0029; KEGG: pmr:PMI3552 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0029, Impact; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal. | 0.561 |
AEF54226.1 | rapA | Mar181_1179 | Mar181_1177 | RmuC-domain protein; PFAM: RmuC; KEGG: psb:Psyr_3666 hypothetical protein. | Helicase domain-containing protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.562 |
era | AEF54225.1 | Mar181_2657 | Mar181_1178 | GTP-binding protein Era-like-protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Protein of unknown function UPF0029; KEGG: pmr:PMI3552 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0029, Impact; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal. | 0.410 |
rapA | AEF54223.1 | Mar181_1177 | Mar181_1176 | Helicase domain-containing protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: pmu:PM1836 hypothetical protein. | 0.819 |
rapA | AEF54225.1 | Mar181_1177 | Mar181_1178 | Helicase domain-containing protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | Protein of unknown function UPF0029; KEGG: pmr:PMI3552 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0029, Impact; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal. | 0.792 |
rapA | AEF54226.1 | Mar181_1177 | Mar181_1179 | Helicase domain-containing protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | RmuC-domain protein; PFAM: RmuC; KEGG: psb:Psyr_3666 hypothetical protein. | 0.562 |