STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF54701.1PFAM: Type II secretion system F domain; KEGG: pmu:PM0086 HofC. (354 aa)    
Predicted Functional Partners:
AEF54702.1
Type II secretion system protein E; KEGG: xbo:XBJ1_3460 putative integral membrane protein involved in biogenesis of fimbriae (type IV pilin), protein transport, DNA uptake with P-loop containing NTP hydrolysis domain; PFAM: Type II secretion system protein E; SMART: ATPase, AAA+ type, core.
  
 
 0.992
AEF56153.1
KEGG: cps:CPS_3332 hypothetical protein.
  
  
 0.932
AEF54700.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.916
AEF54703.1
KEGG: vfm:VFMJ11_2298 fimbrial protein (pilin) (strain P1); Belongs to the N-Me-Phe pilin family.
     
 0.831
yacG
UPF0243 zinc-binding protein yacG; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.
       0.800
coaE
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.800
AEF55576.1
TIGRFAM: Competence protein ComEA, helix-hairpin-helix region; KEGG: ppf:Pput_3898 helix-hairpin-helix repeat-containing competence protein ComEA.
 
  
 0.777
AEF54877.1
KEGG: xne:XNC1_1567 putative recombination protein with metallo-hydrolase domain; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
  
  
 0.773
AEF56241.1
PFAM: Type II/III secretion system; KEGG: eay:EAM_3241 protein transport protein; Belongs to the bacterial secretin family.
   
 
 0.753
AEF54696.1
Histidine kinase; PFAM: ATP-binding region, ATPase-like; KEGG: maq:Maqu_0896 histidine kinase.
     
 0.703
Your Current Organism:
Marinomonas posidonica
NCBI taxonomy Id: 491952
Other names: M. posidonica IVIA-Po-181, Marinomonas posidonica IVIA-Po-181, Marinomonas posidonica str. IVIA-Po-181, Marinomonas posidonica strain IVIA-Po-181, Marinomonas sp. IVIA-Po-181
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