STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF54961.1Beta-galactosidase; KEGG: msv:Mesil_2394 beta-galactosidase; PFAM: Glycoside hydrolase, family 42, N-terminal; Beta-galactosidase trimerisation; Beta-galactosidase C-terminal. (656 aa)    
Predicted Functional Partners:
AEF54967.1
Alpha-galactosidase; KEGG: enc:ECL_05078 alpha-galactosidase; PFAM: Glycoside hydrolase, clan GH-D.
 
  
 0.995
AEF54968.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pin:Ping_2009 ABC sugar transporter inner membrane binding protein.
 
  
 0.919
AEF54415.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.914
AEF54969.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pin:Ping_2010 ABC transporter substrate binding inner membrane protein.
 
    0.905
AEF54960.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: pin:Ping_2008 ABC transporter extracellular solute-binding protein.
 
   
 0.882
AEF54964.1
2-dehydro-3-deoxygalactonokinase; KEGG: pat:Patl_0898 2-keto-3-deoxy-galactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase; Carbohydrate kinase, FGGY, N-terminal.
 
     0.826
AEF54963.1
KEGG: avn:Avin_51330 2-keto-3-deoxy-6-phosphogalactonate aldolase; PFAM: KDPG/KHG aldolase.
 
     0.824
AEF54965.1
KEGG: gdj:Gdia_0389 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR.
 
    0.804
AEF54962.1
SMP-30/Gluconolaconase/LRE-like region-containing protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: cja:CJA_2773 regucalcin.
       0.785
AEF54966.1
KEGG: sit:TM1040_3487 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
       0.774
Your Current Organism:
Marinomonas posidonica
NCBI taxonomy Id: 491952
Other names: M. posidonica IVIA-Po-181, Marinomonas posidonica IVIA-Po-181, Marinomonas posidonica str. IVIA-Po-181, Marinomonas posidonica strain IVIA-Po-181, Marinomonas sp. IVIA-Po-181
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