STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF55050.1PFAM: Protein of unknown function DUF112, transmembrane; KEGG: csa:Csal_0165 hypothetical protein. (656 aa)    
Predicted Functional Partners:
AEF55049.1
KEGG: csa:Csal_0164 hypothetical protein.
 
  
 0.934
AEF55085.1
KEGG: hel:HELO_2268 tripartite tricarboxylate transporter (TTT) family, substrate binding protein.
 
  
 0.849
AEF55716.1
KEGG: rsh:Rsph17029_3032 hypothetical protein.
 
  
 0.849
AEF56524.1
KEGG: pmy:Pmen_1457 hypothetical protein.
 
  
 0.847
AEF53467.1
KEGG: rde:RD1_1867 exported protein, putative.
 
  
 0.842
AEF55084.1
KEGG: hel:HELO_2269 tripartite tricarboxylate transporter (TTT) family, small transmembrane protein.
 
  
 0.653
AEF55048.1
PFAM: PrpF protein; KEGG: csa:Csal_0163 methylitaconate delta2-delta3-isomerase.
 
     0.629
AEF56525.1
KEGG: maq:Maqu_2896 putative tricarboxylic transport membrane protein.
 
  
 0.619
AEF55051.1
Amino acid carrier protein; KEGG: psm:PSM_A1147 sodium/proton-dependent alanine carrier protein; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter.
       0.409
Your Current Organism:
Marinomonas posidonica
NCBI taxonomy Id: 491952
Other names: M. posidonica IVIA-Po-181, Marinomonas posidonica IVIA-Po-181, Marinomonas posidonica str. IVIA-Po-181, Marinomonas posidonica strain IVIA-Po-181, Marinomonas sp. IVIA-Po-181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.