STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF55183.1KEGG: maq:Maqu_3687 hypothetical protein. (441 aa)    
Predicted Functional Partners:
AEF55184.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: dsa:Desal_3300 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region.
       0.631
AEF55185.1
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; Signal transduction response regulator, receiver region; KEGG: syn:slr2104 hybrid sensory kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; Signal transduction response regulator, receiver region.
       0.631
AEF55186.1
KEGG: reu:Reut_B5476 hypothetical protein.
       0.539
AEF53642.1
KEGG: hch:HCH_01368 hypothetical protein.
  
     0.505
AEF55187.1
PFAM: Peptidase A1; KEGG: smd:Smed_2391 peptidase A1 pepsin.
       0.463
AEF53470.1
KEGG: pat:Patl_2219 cytochrome b561.
  
     0.432
Your Current Organism:
Marinomonas posidonica
NCBI taxonomy Id: 491952
Other names: M. posidonica IVIA-Po-181, Marinomonas posidonica IVIA-Po-181, Marinomonas posidonica str. IVIA-Po-181, Marinomonas posidonica strain IVIA-Po-181, Marinomonas sp. IVIA-Po-181
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