STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF55511.1Type VI secretion system Vgr family protein; KEGG: vcj:VCD_000215 VgrG protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Rhs element Vgr protein. (651 aa)    
Predicted Functional Partners:
AEF55522.1
Type VI secretion protein, VC_A0111 family; KEGG: vco:VC0395_0027 hypothetical protein; TIGRFAM: Protein of unknown function DUF1305; PFAM: Protein of unknown function DUF1305.
 
  
 0.896
AEF55526.1
Type VI secretion protein, VC_A0107 family; KEGG: vcj:VCD_000137 uncharacterized protein ImpB; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301.
 
  
 0.894
AEF53711.1
Type VI secretion protein, VC_A0107 family; KEGG: vsp:VS_1332 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301.
 
  
 0.891
AEF55518.1
KEGG: vcj:VCD_000129 ImpK/VasF outer membrane protein; TIGRFAM: Type IV / VI secretion system, DotU; PFAM: Type IV / VI secretion system, DotU.
 
  
 0.878
AEF55512.1
KEGG: vco:VC0395_A1025 hcp protein; TIGRFAM: Type VI secretion system effector, Hcp1; PFAM: Virulence factor, secretion apparatus.
 
  
 0.877
AEF55525.1
Type VI secretion protein, EvpB/VC_A0108 family; KEGG: vcj:VCD_000136 uncharacterized protein ImpC; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877.
 
  
 0.869
AEF55514.1
Type VI secretion-associated protein, VC_A0119 family; TIGRFAM: Type VI secretion system-associated, VCA0119; KEGG: vcj:VCD_000125 uncharacterized protein ImpA.
 
  
 0.857
AEF55523.1
KEGG: vcj:VCD_000134 protein ImpG/VasA; TIGRFAM: Type VI secretion system, VCA0110; PFAM: Type VI secretion system, VCA0110.
 
  
 0.856
AEF55519.1
Type VI secretion protein, VC_A0114 family; KEGG: vcj:VCD_000130 uncharacterized protein ImpJ/VasE; TIGRFAM: Protein of unknown function DUF876, bacterial; PFAM: Protein of unknown function DUF876, bacterial.
 
  
 0.854
AEF53709.1
KEGG: vsp:VS_1334 hypothetical protein.
 
  
 0.845
Your Current Organism:
Marinomonas posidonica
NCBI taxonomy Id: 491952
Other names: M. posidonica IVIA-Po-181, Marinomonas posidonica IVIA-Po-181, Marinomonas posidonica str. IVIA-Po-181, Marinomonas posidonica strain IVIA-Po-181, Marinomonas sp. IVIA-Po-181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.