STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF56003.1ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: pfs:PFLU0553 high-affinity branched-chain amino acid transporter permease; Belongs to the binding-protein-dependent transport system permease family. (303 aa)    
Predicted Functional Partners:
AEF56001.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: pst:PSPTO_4916 high affinity branched-chain amino acid ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core.
 
 
 0.999
AEF56002.1
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: pfo:Pfl01_0554 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
AEF56000.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: pag:PLES_52951 putative ATP-binding component of ABC transporter; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
 
 
 0.996
AEF56004.1
PFAM: Extracellular ligand-binding receptor; KEGG: pap:PSPA7_5638 putative ABC transporter binding protein subunit.
 
 
 0.996
AEF55344.1
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: mlo:mll7200 ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.988
AEF55346.1
KEGG: rlg:Rleg_4799 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
 
 0.984
AEF55348.1
KEGG: rec:RHECIAT_PC0000926 putative branched-chain amino acid ABC transporter, substrate-binding protein.
 
 
 0.973
AEF55347.1
ABC transporter related protein; KEGG: rec:RHECIAT_PC0000927 putative branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
  
  0.971
AEF55345.1
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: rle:pRL120490 putative permease component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.926
AEF56173.1
SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtE; KEGG: pin:Ping_2990 ABC transporter ATP-binding protein; PFAM: ABC transporter-like.
 
  
 0.657
Your Current Organism:
Marinomonas posidonica
NCBI taxonomy Id: 491952
Other names: M. posidonica IVIA-Po-181, Marinomonas posidonica IVIA-Po-181, Marinomonas posidonica str. IVIA-Po-181, Marinomonas posidonica strain IVIA-Po-181, Marinomonas sp. IVIA-Po-181
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