STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF56084.1PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: pfs:PFLU5792 ferredoxin. (83 aa)    
Predicted Functional Partners:
AEF53402.1
NADH dehydrogenase (quinone); KEGG: hch:HCH_00804 putative monovalent cation/H+ antiporter subunit A; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; Na+/H+ antiporter MnhB subunit-related protein.
  
 
 0.998
nfuA
Fe/S biogenesis protein nfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
  
 0.889
AEF56429.1
Hypothetical protein.
  
 
 0.876
AEF53074.1
KEGG: lch:Lcho_1439 NmrA family protein.
   
 0.864
AEF55410.1
KEGG: swi:Swit_4159 NmrA family protein.
   
 0.864
AEF54314.1
KEGG: maq:Maqu_1153 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein.
   
 
 0.823
atpC
ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.791
AEF55566.1
TIGRFAM: Amino acid adenylation; KEGG: bcg:BCG9842_B2988 nonribosomal peptide synthetase DhbF; PFAM: AMP-dependent synthetase/ligase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.782
AEF55153.1
PFAM: Glycosyl transferase, family 9; KEGG: vsa:VSAL_I0240 lipopolysaccharide core biosynthesis glycosyl transferase protein.
  
   0.775
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 0.767
Your Current Organism:
Marinomonas posidonica
NCBI taxonomy Id: 491952
Other names: M. posidonica IVIA-Po-181, Marinomonas posidonica IVIA-Po-181, Marinomonas posidonica str. IVIA-Po-181, Marinomonas posidonica strain IVIA-Po-181, Marinomonas sp. IVIA-Po-181
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.